The Linux Bible yggdrasil.com GC (Compendium still good but old)
Linux Network Toolkit - Sery, IDG Books
Linux Secrets - Bakrakati, IDG Books S (Compendium)
Linux Database - Butzen, Forbes, MIS Press
Linux Application Development - Johnson, Troan, Addison Wesley
Linux Network Administrator's Guide - Kirch, O'Reilley & Ass.
Linux Undercover -Raymond, Red Hat Software RH (Compendium, Poorly indexed but has lotsa stuff)
Linux in a Nutshell - Hekman, O'Reilley & Ass. (Quick Reference)
RH Red Hat Slant
S Slackware Slant
G General
No book has it all. I would strongly recommend a general UNIX manual as well and an introduction to Unix. this field is covered by Que Books (Understanding Unix) and SAMS publishing in their "Unleashed" series.
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