SI
SI
discoversearch

We've detected that you're using an ad content blocking browser plug-in or feature. Ads provide a critical source of revenue to the continued operation of Silicon Investor.  We ask that you disable ad blocking while on Silicon Investor in the best interests of our community.  If you are not using an ad blocker but are still receiving this message, make sure your browser's tracking protection is set to the 'standard' level.
Biotech / Medical : AFFYMETRIX (AFFX)
AFFX 14.010.0%Apr 1 5:00 PM EST

 Public ReplyPrvt ReplyMark as Last ReadFilePrevious 10Next 10PreviousNext  
To: Jon Koplik who wrote (1506)6/26/2001 6:00:00 PM
From: Maurice Winn  Read Replies (1) of 1728
 
<The surprising answer is that these patients respond differently to treatment because, in fact, they are suffering from completely different types of lymphoma. Using what they dubbed a "Lymphochip," a customized Affymetrix DNA chip, Staudt and a group at Stanford led by
geneticist David Botstein discovered distinctive genetic differences between the cancers in the patients with large B-cell lymphoma who died and those who survived. "I was blown away by what we found," says Botstein. Effectively, they were looking at two different illnesses. "It's remarkable," says Staudt. "We found something in this disease that was missed for all the years pathologists were looking at it."
>

I don't know what they found, but I know there is a mutation in the p53 gene which, if a diffuse, large, B-Cell Non-Hodgkins lymphoma patient has it, they are in big trouble. I think only 3% of them get to 5 year survival. Those people need some other treatment than the standard surgery, CHOP and radiation. Their health is badly damaged by the treatment, without the benefit of life-expectancy improvement.

Their numbers just go into the overall statistical pool which is used to decide the efficacy of treatment and prognosis.

Perhaps they are just talking about the same thing because for 3 years I've been ranting
Message 2824160
Message 2990164 that p53 tests need to be done using chip arrays [such as Affymetrix's] to see whether a person is in the 'game over' or 'good prospects' group.

I expect DNA microarrays to be big time. One thing I've learned is how very individual we all are. While particular cancers have broad similarities, we are each very individual in the precise nature of those cancers [lymphoma isn't just lymphoma - even within one person a particular cancer forms a multiplicity of cell-types, which might or might not react to a particular treatment, which is why cancers become immune to treatment].

Every cancer cell should ideally have it's own treatment. Not only that, but every person's circumstances are different. A very rich young person with a tough immune system is in a different position from a poor, old person with little holding them together. It's all very well to develop a treatment but not much use if few can afford it. So a range of treatments is needed.

The first thing needed is to define the range of cancer cells in each person. That takes DNA microarrays rather than gawping at the shape of cancer cells through a microscope. At present, because there are few treatments available, gawping is about as useful as DNA analysis. CHOP is all there is for a lot of lymphomas, so whatever the DNA array says, the treatment is the same.

As monoclonal antibodies and dendritic cell vaccines and other treatments develop, DNA analysis will become the means of knowing what to do.

Of course, somebody might come up with a smart way of fiddling with telomerase, curing all cancer! esculape.com Then the demand for DNA analysis would drop dramatically. Virtually all cancers have this telomerase problem, so we'd be back to [almost] universal treatment!

Mqurice

PS: I'm glad you are still posting and not on strike. I clicked on your name to see if you were posting and hey presto, here you were.
Report TOU ViolationShare This Post
 Public ReplyPrvt ReplyMark as Last ReadFilePrevious 10Next 10PreviousNext